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Table 1 Metrics of the minion sequencing run and assignments of taxonomic Reads

From: Improvement of Nanopore sequencing provides access to high quality genomic data for multi-component CRESS-DNA plant viruses

Sample

Total number of reads

Reads passed quality control

Average of read length

N50

Mean quality

Reads of Begomovirus / Nanovirus

Cassava

21,362

20,336 [4,545]

3,910.5 [3,744.6]

7,227 [6,904.0]

13.4 [12.9]

1,355 [1,178]

Common vetch

542,538

521,363

2,158.1

3,745

15.0

139,963

  1. Numbers in brackets indicate the values for the cassava sample described in this study
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Virology Journal

ISSN: 1743-422X